Sequence-dependent persistence lengths of DNAA study of DNA persistence lengths using a code cgDNAmc to run Monte Carlo simulations within the cgDNA coarse grain model. The cgDNAmc simulation code, as well as the cgDNAparamset2 used in the simulations are available for download.
- Jonathan S. Mitchell, Jaroslaw Glowacki, Alexandre E. Grandchamp, Robert S. Manning and John H. Maddocks, Sequence-dependent persistence lengths of DNA. Journal of Chemical Theory and Computation 13, 2017; doi:10.1021/acs.jctc.6b00904. (PDF of the main text and the supporting information)