Lab Software

cgDNA (Coarse-grain DNA parameter construction scripts and datasets)

HelicalEquilibria (A visualisation tool for studying parameter dependence of the space of helical equilibria of elastic rods)

Algebra3D (A C++ library for 3D transformations using vectors, matrices, quaterions and Cayley vectors)

3D-DNA (A visualization tool for studying the eigenmodes of a coarse-grained model of DNA)

libbiarc (Curve and knot manipulation, analysis and visualization toolkit)

Deprecated

VBM (Visualization for Bifurcation Manifold)

DataViewer (General visualization software)

Snake (Tracking DNA on pairs of stereo-images)

Slinky (Interactive solving of an IVP)