Diagonal stiffnesses (diag K)

Plots of diagonal elements of the stiffness matrix for the sequences 1-56 from the training data set. Each figure contains four panels. The two panels on the left are plots of the intra base pair parameter diagonal couplings and the two panels on the right are plots of inter base pair (junction) parameter diagonal couplings. Rotational parameters are plotted in the top panels and translational parameters are in the bottom panels. Sequences are indicated on the abscissa of each plot.

For better visualization parameter values are interpolated by piecewice-linear curves, where solid lines correspond to the parameters estimated directly from the MD data, dashed-dotted lines correspond to the nearest-neighbour model stiffness entries, and dashed lines correspond to the parameters reconstructed from our dimer dependent parameter set.


S1_diag_stiffnesses.png S29_diag_stiffnesses.png
S2_diag_stiffnesses.png S30_diag_stiffnesses.png
S3_diag_stiffnesses.png S31_diag_stiffnesses.png
S4_diag_stiffnesses.png S32_diag_stiffnesses.png
S5_diag_stiffnesses.png S33_diag_stiffnesses.png
S6_diag_stiffnesses.png S34_diag_stiffnesses.png
S7_diag_stiffnesses.png S35_diag_stiffnesses.png
S8_diag_stiffnesses.png S36_diag_stiffnesses.png
S9_diag_stiffnesses.png S37_diag_stiffnesses.png
S10_diag_stiffnesses.png S38_diag_stiffnesses.png
S11_diag_stiffnesses.png S39_diag_stiffnesses.png
S12_diag_stiffnesses.png S40_diag_stiffnesses.png
S13_diag_stiffnesses.png S41_diag_stiffnesses.png
S14_diag_stiffnesses.png S42_diag_stiffnesses.png
S15_diag_stiffnesses.png S43_diag_stiffnesses.png
S16_diag_stiffnesses.png S44_diag_stiffnesses.png
S17_diag_stiffnesses.png S45_diag_stiffnesses.png
S18_diag_stiffnesses.png S46_diag_stiffnesses.png
S19_diag_stiffnesses.png S47_diag_stiffnesses.png
S20_diag_stiffnesses.png S48_diag_stiffnesses.png
S21_diag_stiffnesses.png S49_diag_stiffnesses.png
S22_diag_stiffnesses.png S50_diag_stiffnesses.png
S23_diag_stiffnesses.png S51_diag_stiffnesses.png
S24_diag_stiffnesses.png S52_diag_stiffnesses.png
S25_diag_stiffnesses.png S53_diag_stiffnesses.png
S26_diag_stiffnesses.png S54_diag_stiffnesses.png
S27_diag_stiffnesses.png S55_diag_stiffnesses.png
S28_diag_stiffnesses.png S56_diag_stiffnesses.png