Hydrogen bond filtering

Plots histograms of hydrogen bond lengths (in Å) for the sequences 1-56 from the training data set. For each sequence, the panels corresponding to individual hydrogen bonds are ordered from left to right and from bottom to top. The index of the hydrogen bond and the corresponding base are indicated on each panel.

For fitting our model parameters only data from the MD snapshots of DNA without broken hydrogen bonds was used. We consider a hydrogen bond broken if the distance between the corresponding atoms is above 4 Å.


S1_hb_hist.png S29_hb_hist.png
S2_hb_hist.png S30_hb_hist.png
S3_hb_hist.png S31_hb_hist.png
S4_hb_hist.png S32_hb_hist.png
S5_hb_hist.png S33_hb_hist.png
S6_hb_hist.png S34_hb_hist.png
S7_hb_hist.png S35_hb_hist.png
S8_hb_hist.png S36_hb_hist.png
S9_hb_hist.png S37_hb_hist.png
S10_hb_hist.png S38_hb_hist.png
S11_hb_hist.png S39_hb_hist.png
S12_hb_hist.png S40_hb_hist.png
S13_hb_hist.png S41_hb_hist.png
S14_hb_hist.png S42_hb_hist.png
S15_hb_hist.png S43_hb_hist.png
S16_hb_hist.png S44_hb_hist.png
S17_hb_hist.png S45_hb_hist.png
S18_hb_hist.png S46_hb_hist.png
S19_hb_hist.png S47_hb_hist.png
S20_hb_hist.png S48_hb_hist.png
S21_hb_hist.png S49_hb_hist.png
S22_hb_hist.png S50_hb_hist.png
S23_hb_hist.png S51_hb_hist.png
S24_hb_hist.png S52_hb_hist.png
S25_hb_hist.png S53_hb_hist.png
S26_hb_hist.png S54_hb_hist.png
S27_hb_hist.png S55_hb_hist.png
S28_hb_hist.png S56_hb_hist.png