PC cgDNAmin: Kahn & Crothers sequence

Periodic closure cgDNAmin results for the 4 initial guesses highlighted in the following bifurcation diagram:

From the results we observe that solutions for guesses A and D show the same configuration and solutions given by guesses B and C are the same.

Solution for initial guess A:

Link Energy Smallest Eigenvalue
Initial guess A 15 407 -
Solution A 15 35 1.48e-6



MATLAB figures saved variables:
Kahn-Crothers_3Dsol1_PCcgDNAmin.fig
Kahn-Crothers_2Dsol1_PCcgDNAmin.fig
Kahn-Crothers_sol1_PCcgDNAmin.mat

Solution for initial guess B:

Link Energy Smallest Eigenvalue
Initial guess B 14 471 -
Solution B 14 84 2.23e-6



MATLAB figures and saved variables:
Kahn-Crothers_3Dsol2_PCcgDNAmin.fig
Kahn-Crothers_2Dsol2_PCcgDNAmin.fig
Kahn-Crothers_sol2_PCcgDNAmin.mat

Solution for initial guess C:

Link Energy Smallest Eigenvalue
Initial guess C 14 472 -
Solution C 14 84 2.26e-6



MATLAB figures and saved variables:
Kahn-Crothers_3Dsol4_PCcgDNAmin.fig
Kahn-Crothers_2Dsol4_PCcgDNAmin.fig
Kahn-Crothers_sol4_PCcgDNAmin.mat

Solution for initial guess D:

Link Energy Smallest Eigenvalue
Initial guess D 15 688 -
Solution D 15 35 1.46e-6



MATLAB figures and saved variables:
Kahn-Crothers_3Dsol10_PCcgDNAmin.fig
Kahn-Crothers_2Dsol10_PCcgDNAmin.fig
Kahn-Crothers_sol10_PCcgDNAmin.mat